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CAZyme Gene Cluster: MGYG000002960_10|CGC1
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000002960_00546 | Extracellular xylan exo-alpha-(1->2)-glucuronosidase |
CAZyme | 37979 | 39991 | - | GH67 |
| MGYG000002960_00547 | Sensor histidine kinase RcsC |
TF | 40019 | 43939 | - | HTH_AraC |
| MGYG000002960_00548 | hypothetical protein |
null | 44218 | 45390 | + | Lipase_GDSL_2 |
| MGYG000002960_00549 | putative symporter YjmB |
TC | 45403 | 46806 | + | 2.A.2.3.2 |
| MGYG000002960_00550 | Endo-1,4-beta-xylanase A |
CAZyme | 46838 | 47962 | + | GH10| 3.2.1.8 |
| MGYG000002960_00551 | Xylosidase/arabinosidase |
CAZyme | 48024 | 48989 | + | GH43| GH43_1 |
| MGYG000002960_00552 | hypothetical protein |
null | 49251 | 50651 | + | DUF5687 |
| MGYG000002960_00553 | Oligopeptide transport ATP-binding protein OppF |
TC | 50688 | 51398 | + | 3.A.1.124.5 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is xylan
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000002960_00546 | GH67_e0|3.2.1.139|3.2.1.131|3.2.1.- | xylan |
| MGYG000002960_00550 | GH10_e85|3.2.1.8 | xylan |
| MGYG000002960_00551 | GH43_e85|3.2.1.55|3.2.1.37 | xylan |
Substrate predicted by dbCAN-PUL is xylan download this fig
